Take a bite at the Bight – and its deep ocean ecosystem

One of the many animals collected from the Bight’s deep water column, the unusual amphipod (genus Phronima) – a type of crustacean.

One of the many animals collected from the Bight’s deep water column, the unusual amphipod (genus Phronima) – a type of crustacean.

At the surface, it is home to white sharks, southern bluefin tuna, and marine mammals including blue whales and sealions – the images that make the Great Australian Bight a vast and iconic Australian ocean region.

Down deep there’s another lesser known world – and a frontier area for marine science, plus oil and gas exploration. Although we know that more than 85 per cent of shallow Bight species (such as those mentioned above) can be found nowhere else in the world, very little is known about their deep water counterparts.

We recently returned from 20 days exploring deep waters of the Bight – the first voyage supporting our recently announced science collaboration with BP and Marine Innovation Southern Australia (MISA, a consortium of South Australia’s major marine research institutions, including the South Australian Research and Development Institute, University of Adelaide, Flinders University and the South Australian Museum); a collaboration aimed at gaining a greater scientific understanding of the Bight.

In the video below meet CSIRO’s Mark Lewis and see our research in action.

In one of only a few whole-of-ecosystem studies undertaken in Australia, CSIRO and MISA are providing information to decision makers in industry and government to support sustainable development in the Bight and monitor possible future impacts.

Aboard Australia’s Marine National Facility research vessel, the Southern Surveyor (check out a virtual tour of the ship), we surveyed the Bight in depths of 200 to 2000 metres – collecting the deepest set of samples ever taken from the area.

Using a range of equipment, we collected samples of fauna from the seabed and the water column such as fishes, crustaceans (shrimp and crabs) and echinoderms (sea stars, sea urchins and sea cucumbers) and phytoplankton (single-celled plants).  These included unusual species like the bizarre amphipod Phronima (see picture above) and this deep sea crab (below).

One of the many animals collected from the Bight’s deep seabed, we think it could be a new species but we’re checking (it is similar to Ebalia tuberculosa).

One of the many animals collected from the Bight’s deep seabed, we think it could be a new species but we’re checking (it is similar to Ebalia tuberculosa).

 We also collected a great variety of environmental information, including acoustic data that will help map the seabed and determine if oil seeps are present. We used what’s called an integrated coring platform (ICP), pictured below, which collects sediment cores from the seabed plus acoustic measurements (we recently blogged about this piece of gear).

Matt Sherlock with the Integrated Coring Platform (ICP). This instrument is lowered to the seafloor, where it collects a set of six sediment cores, along with a water sample. On the way down, and the way back up, it also collects information on the presence of hydrocarbons, and sends out an acoustic signal (much like that of a depth sounder on a boat) to measure fish and plankton presence.

CSIRO electrical engineer, Matt Sherlock with the Integrated Coring Platform (ICP). This instrument is lowered to the seafloor, where it collects a set of six sediment cores, along with a water sample. On the way down, and the way back up, it also collects information on the presence of hydrocarbons, and sends out an acoustic signal (much like that of a depth sounder on a boat) to measure fish and plankton presence.

There is a reason that we’re collecting all of these wonderful critters, samples and data – it will help us understand the composition, distribution and number of species in the Bight, and the ways in which they are influenced by the environment around them. This will be vital information for any potential development in the Bight.

All of this information contributes to an ecosystem model, which will help CSIRO, MISA and BP understand how the ecosystem could change with, for example, future development or exploration (for oil and gas for example), allowing industry and government to plan for future activities in the region in an informed way. 

Survey results will be made available to decision makers in industry and government – to help evaluate the needs for future ecological monitoring as oil and gas activities accelerate and expand in Australia’s deep ocean.

Read more about our Great Australian Bight collaboration with BP and MISA.

Mark Green with a recently collected sediment core from the Bight, which will be used to assess the fauna present in the sediments. These are some of the deepest samples ever collected from the Great Australian Bight.

CSIRO ecologist, Mark Green with a recently collected sediment core from the Bight, which will be used to assess the fauna present in the sediments. These are some of the deepest samples ever collected from the Great Australian Bight.

Last but not least – another amazing piece of gear – the conductivity, temperature, depth sensor (CTD) with niskin bottles (water sampling bottles) for collecting water samples. The instrument is lowered to just above the seabed, recording data on salinity, temperature, oxygen levels, and fluorescence (an indicator of phytoplankton presence) all the way.  Niskin bottles are then fired at specified depths on the way up to collect water samples for detailed analysis of hydrocarbons, phytoplankton and nutrients.

Last but not least – another amazing piece of gear – the conductivity, temperature, depth sensor (CTD) with niskin bottles (water sampling bottles) for collecting water samples. The instrument is lowered to just above the seabed, recording data on salinity, temperature, oxygen levels, and fluorescence (an indicator of phytoplankton presence) all the way. Niskin bottles are then fired at specified depths on the way up to collect water samples for detailed analysis of hydrocarbons, phytoplankton and nutrients.


What do Aussies think about the Great Barrier Reef?

A pink anemone fish in a magnificent anemone, Ribbon Reefs, Great Barrier Reef.

A pink anemone fish in a magnificent anemone, Ribbon Reefs, Great Barrier Reef. Just one of the 1,625 species of bony fish found in the reef.

Australia’s iconic Great Barrier Reef attracts nearly two million tourists every year and it runs for 2300km down the east coast – so big it can be seen from outer space.

But what does the Great Barrier Reef mean to you? Well, CSIRO wants to know!

In a study exploring how people interact with the reef, what they love about it and what they want to protect, CSIRO will be posing questions to 5000 people across Queensland to find out.

Discovering what people really think is important about the Great Barrier Reef will help shape how the region is managed in the future.

Locals, tourists and business operators from Cooktown to Bundaberg will be quizzed over the next two months and a snapshot of their opinions will be published by the end of the year.

We will be approaching people to complete the quick 15 minute survey in shopping centres, beaches and tourist hotspots. Tourism operators and commercial fishers working in the region will be interviewed over the telephone.

Tourists with underwater scooters at Vlasoff sand cay.

Tourists with underwater scooters at Vlasoff sand cay. Nearly two million tourists visit the Great Barrier Reef each year.

Amazing facts about the Great Barrier Reef:

  • The reef runs for 2300km down the east coast of Australia – so big it can be seen from outer space
  • The United Nations Educational, Scientific and Cultural Organisation (UNESCO) listed the Great Barrier Reef as a World Heritage Site in 1981
  • The Reef is home to the world’s largest collection of coral reefs, with 400 types of coral, 1625 species of bony fish and 3000 types of mollusc
  • Within the Great Barrier Reef World Heritage Area (348,000 square kilometres) there are almost 3000 individual reefs of varying sizes and shapes, and over 900 islands
  • About ten thousand ships travel through the reef area every year
  • Commercial fishing is the fifth largest primary industry by value in Queensland, with a value of about $360 million each year
  • More than 70 Aboriginal and Torres Strait Islander Traditional Owner clan groups along the east coast of Queensland assert Native Title rights, interests and responsibilities in the Great Barrier Reef Marine Park.*
Sooty and crested terns nesting on Taylor sand cay (with eggs and chicks).

Sooty and crested terns nesting on Taylor sand cay (with eggs and chicks) – just two of the hundreds of different species of birds that have been found across the Great Barrier Reef.

Find out more about our social research on the Great Barrier Reef:

*Facts thanks to www.unesco.org, www.reef.crc.org.au [12 June 2013] and the Great Barrier Reef Marine Park Authority (GBRMPA).


Our fascination with northern Australia

Image: Amanda B Slater.

Burke and Wills’ ill-fated expedition left many intrigued about the potential of northern Australia. Image: Amanda B Slater.

By Dr Andrew Johnson

On February 11, 1861, Robert O’Hara Burke reached the Gulf of Carpentaria. He described in his diary the environment as “a considerable portion is rangy but it is well watered and richly grassed”.

More than 150 years after the ill-fated Burke and Wills expedition, many Australians consider north Australia to be a place of limitless potential. Throughout the 20th century, governments promoted development in the north. With a few notable exceptions, these have ended in failure.

More recently, state and federal governments of both political persuasions have had the foresight and courage to mandate scientific investigations to quantify the capacity of the north’s land and water assets, and to understand constraints to sustainable development presented by market opportunities, transport infrastructure and land tenure.

The passionate commentary demonstrates the diversity of views and the breadth of misunderstanding about the challenges of the tropics. Indeed, there are perhaps more urban myths about northern Australia than any other part of the nation. So let’s get some facts on the table.

We can sustainably double or triple the north's irrigation area using renewable groundwater resources. Image: CIMMYT.

Renewable groundwater resources can help increase the north’s irrigation area. Image: CIMMYT.

Our scientists have identified the capacity to sustainably double or triple the north’s irrigation area using renewable groundwater resources. The potential is even greater if surface water is used. History has shown the challenges. Unlocking investment requires confidence about the scale of opportunities, and knowing the risks. A scarcity of detailed information about soil and water availability made it difficult to establish water storage options or agricultural productivity estimates or establish locations for irrigation. The cost of acquiring reliable soil, water and agricultural productivity estimates has often been an insurmountable barrier to private and public investors.

Underdeveloped transport infrastructure and long distances increase the cost of accessing inputs and selling outputs, as well as reducing the mass, quality and value of commodities.

Inconsistency in land and water regulations across jurisdictions and lack of clarity within them poses significant barriers to investment. Northern Australian tenure systems are complex. There are multiple, often overlapping tenure types for the same piece of land. Administrative arrangements vary across state boundaries. There are new and emergent tenures for water and carbon that are uncertain and are evolving.

Image: Kay Ledbetter.

We’re working to improve irrigated agriculture practices. Image: Kay Ledbetter.

Despite this, there are positive developments. In the Gulf country, the federal and Queensland governments, with our researchers, have demonstrated methods for rapidly and economically quantifying water flow and function, identifying water storage options, constructing soil maps of high precision and combining them to establish estimates of regional agricultural production potential. In the east Kimberley, the tireless efforts of government and the community are now driving profound positive change in the Ord. These examples provide a blue print for irrigated agriculture across the north.

The establishment of mosaic irrigation for the beef industry will enable increased productivity by overcoming seasonal feed shortages and intensifying production. This will allow producers to improve long-term viability. A year-round feed supply will also enable more efficient use of existing beef industry infrastructure.

Smarter transport logistics that deliver least-cost pathways for existing infrastructure – critical where rerouting is often required in response to flooding – is essential. A focus on logistics will prioritise investment in strategic infrastructure such as holding yards, rest stops, road configuration, the location of abattoirs and more efficient use of ports.

Image: Alternative Heat.

Smarter transport logistics will help aid our response to agricultural flooding. Image: Alternative Heat.

We also need to address property rights. Changes to land tenure regimes have the potential to transform indigenous communities from welfare dependency to economic participation as well as creating a more positive environment for investment. Changes to tenure arrangements are under way that aim to enable more diverse uses and clarify access and use rights. Future efforts must continue to focus on pastoral lands and in clarifying Indigenous interests in land and water.

Perhaps at no time since Federation has the nation’s interest in the north been so strong. A positive agenda will benefit all Australians, especially indigenous peoples. Whatever the actions taken, many will take time to implement; there are no easy fixes. They require patience, persistence, flexibility and a long-term commitment from all stakeholders.

CSIRO Group Executive Andrew Johnson chairs the expert panel advising the Northern Australia Ministerial Forum.


Fault lines lead to gold

Aerial of the San Andeas Fault.

The San Andreas Fault won’t lead you to gold, but a smaller fault line just might…Image: Huffington Post

Small-scale fault systems in the Earth’s crust have a strong correlation with the location of gold, a recent study of the St Ives Goldfields in Western Australia has found.

Our research, published in science journal Ore Geology Reviews, found that all major gold deposits are controlled by faults, but small fault systems are more likely to lead to gold than larger ones.

Researcher Dr Carsten Laukamp says the relationship between fault systems and gold traces is key to understanding the genesis of gold and could be used to help locate any commodity.

“Determining the spatial relationship between geological features such as fault lines, and gold traces, is not only important to understand how deposits form, it can also guide mineral exploration because we can use this information to develop predictive mineral maps,” he says.

predictive map

Predictive mineral map: reds indicate areas of high potential for gold traces and the blues represent the low potential areas.

Dr Laukamp and his team developed a predictive mineral map of the St Ives Goldfields that shows new prospective areas where there is a high likelihood that gold could be located.

“We used information such as rock type, colour, shape and size and geological boundaries – all information we can gather from drilling samples – to develop the map,” Dr Laukamp says.

“This research is one step in the development of predictive mineral maps that integrate various types of geological data.

“Next, we’ll incorporate data collected from aircrafts and satellites, such as geophysical and spectroscopic data, which will improve the information value and accuracy of the predictive mineral map.”

Learn more about our research in mineral exploration.

Media enquiries: Liz Greenbank | 03 9545 8563 | liz.greenbank@csiro.au


Facebook helps solve weather station mystery in Timor-Leste

By Claire Harris

We often hear that Facebook is used to post inane personal updates and share funny cat photos, but it can help scientists do their work, especially when their trial sites are overseas.

We're working to improve the welfare and income of smallholder farmers in Timor-Leste.

We’re working to improve the welfare and income of smallholder farmers in Timor-Leste.

Recently, one of our CSIRO scientists solved an equipment failure mystery by visiting the project’s Facebook site and spotting the problem, through some photo sleuthing just like a spot the difference puzzle.

Neal Dalgliesh, a CSIRO researcher based in Toowoomba in Queensland, works on a project to increase cattle production in East Timor to improve the welfare and income of smallholder farmers.

The project team established a Facebook group to enable researchers to communicate with each other, as they were located in East Timor, Indonesia and Australia.

As part of the project junior scientists have been learning how to set up weather stations that monitor temperature, radiation and rainfall. Data has been streaming in but, to the frustration of researchers, the weather monitoring stations were not working properly.

“For the last two months I had been mystified as to why a radiation sensor in Timor-Leste had been producing strange results,” said Neal.

“We recently replaced the sensor, assuming it was malfunctioning, only to find that we still had a problem,” he said.

Neal visited the project Facebook site and saw a photo of one of his Timor colleagues posing next to the weather station (on the right in the gallery below).

“Totally serendipitously I browsed the Facebook page, enlarged the photo and lo and behold, found the problem; and more importantly, I immediately knew how to solve it.”

“The was a plastic cap covering the sensor, a rookie error,” he said.

It is easy to forget, as the cap is in place to protect the sensor during transport and needs to be removed when the sensor is set up.

A woman using a laptop in the field.

Communication is getting easier for researchers working in the field.

Neal says that making mistakes and learning from them is an important process and despite his many years as a research scientist, he’s learned a lot from this event.

“Never assume anything, start at the simplest explanation first. And use social media in technical communication,” he said.

“If I hadn’t seen the photo, the problem would have remained unsolved for many months. Plus in the old days, it would have taken a number of days or even weeks to communicate this information back to the field researcher.”

“As a result of rapidly improving wireless access, and Skype, I was able to immediately contact another researcher based in Oecusse and he fixed the problem,” he said.

This cattle project receives funding from ACIAR and is led by the University of Queensland, in partnership with CSIRO, Timor Leste Ministry of Agriculture and Fisheries, and the National University of East Timor.

Media enquiries: Claire Harris, claire.harris@csiro.au Phone +61 2 9490 8491


What on earth is rugosity?

Smile! A BRUV (Baited Remote Underwater Video) system filming fish on the sea floor. Image: NERP.

Smile! A BRUV (Baited Remote Underwater Video) system filming fish on the sea floor. Image: NERP.

By Carrie Bengston

Or more accurately, what on the sea floor is rugosity?  If you thought rugosity might have something to do with rugs, you’d be close. It’s the ‘bumpiness’ of a surface. Measuring and mapping the rugosity of the sea floor is one of the topics at a video and acoustics data workshop in Hobart this week (11-12 June).

Over two days, scientists from CSIRO, government agencies and universities will discuss how to handle vast streams of acoustic and video data to better manage fisheries and monitor the environment. The workshop will bring together some of Australia’s leading scientists in the cutting edge fields of multibeam sonar data acquisition and analysis, remote video data acquisition and automated recognition.

A remote underwater video system being deployed by the RV Southern Surveyor. These can record video at depths divers can't go.

A remote underwater video system being deployed by the RV Southern Surveyor. These can record video at depths divers can’t go.

It’s a sad fact that we know more about the moon’s surface than we do about the surface of the sea floor off our own coast. The sea floor has vast amounts of canyons and ridges that are biodiversity hotspots waiting to be uncovered. And while new acoustic and video technologies are providing vast amounts of data, the challenge is how to analyse and interpret it.

Multibeam Sonar Systems (MBSS) are new tools that use sound waves to measure and map surfaces. They can map the canyons and ridges on the sea floor using acoustic gear mounted to the bottom of a boat. Sonar systems work much like medical ultrasounds which detect the shape of a growing foetus. And of course, in nature, bats use reflected sound waves to detect 3D surfaces in dark caves.

This acoustic map shows the location of orange roughy off St Helens in Tasmania.

This acoustic map shows the location of orange roughy off St Helens in Tasmania.

Both multibeam sonar and remote video are relatively new ways of gathering information on marine habitats and communities that are too deep to monitor by divers. They present huge opportunities to better understand the changes in our marine environment, but at the same time they present new challenges in analysing and interpreting the data.

The aim is to highlight these challenges and identify potential solutions, and to apply solutions developed in other areas (such as facial recognition software) into the environmental domain.

So, while the AV guys at the workshop are making sure the lapel mic works and the projector beams the right images, our data gurus will be focused on tackling the challenges of audio and video data from the ocean depths.


More in your hip pocket, less on your hips

Image: iStock.

Eat well without breaking the bank. Image: iStock.

Over the years, we’ve received lots of feedback on our Total Wellbeing Diet (TWD). This nutritionally balanced eating plan has become a popular way to help people stay healthy and lose weight.

In fact, when the first TWD book was released back in 2005, it went straight to the top of the Australian best sellers list, even outselling Harry Potter!

People from all walks of life have told us how they love the food, have lost weight and feel more energetic on the TWD. However, we also know that the diet can be a bit expensive.

So to solve this problem, we’ve published ‘TWD recipes on a budget’. The book includes over 100 new budget-friendly recipes along with handy tips on how to stock your kitchen, grow your own herbs, use inexpensive cuts of meat for slow cooking and transfer leftovers into delicious meals. It’s the perfect how-to guide for preparing healthy, economic meals that don’t compromise on taste or nutrition.

We now have three different recipe books that are designed to help people incorporate the TWD into their daily lives. These include the TWD recipe book (2010), TWD fast and fresh recipes (2012) and TWD recipes on a budget (2013).

If you’re keen to expand your culinary repertoire, here are some recipes to get you started:

Hungry for more? Check out these meal ideas from our health bites series. And for other healthy tips, follow us on Pinterest.


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